Publication List - Mitsuhiro Yanagida Unit

G0 Cell Unit in Okinawa Institute of Science and Technology (OIST)

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Mitsuhiro Yanagida lab Home Page
Mitsuhiro Yanagida lab in Okinawa Institute of Science and Technology

2004 2005 2006 2007 2008 2009 2010 2011 2012 2013 2014 2015


Xu XY, Nakazawa N, Yanagida M. (2015) Condensin HEAT subunits required for DNA repair, kinetochore/centromere function and ploidy maintenance in fission yeast. PLoS One.  10(3)  e0119347.  doi: 10.1371/journal.pone.0119347  [PubMed]


Akai Y, Kanai R, Nakazawa N, Ebe M, Toyoshima C, Yanagida M. (2014) ATPase-dependent auto-phosphorylation of the open condensin hinge diminishes DNA binding. Open Biology.  2014 Dec;4(12).  pii: 140193.  DOI: 10.1098/rsob.140193.  [Open Biol.]   [PubMed]
Murakami I, Chaleckis R, Pluskal T, Ito K, Hori K, Ebe M, Yanagida M and Kondoh H. (2014) Metabolism of Skin-Absorbed Resveratrol into Its Glucuronized Form in Mouse Skin PLOS ONE.  9(12)  :e115359.  DOI: 10.1371/journal.pone.0115359  [PubMed]  [PLOS ONE]
S. Saitoh, A. Mori, L. Uehara, F. Masuda, S. Soejima, M. Yanagida (2014) Mechanisms of expression and translocation of major fission yeast glucose transporters regulated by CaMKK / phosphatases , nuclear shuttling and TOR Mol Biol Cell  Nov 19   pii: mbc.E14-11-1503  doi: 10.1091/mbc.E14-11-1503  [PubMed]  [Mol Biol Cell]
Yanagida, M. (2014) The Role of Model Organisms in the History of Mitosis Research Cold Spring Harbor perspectives in biology  Sep 2;6(9)  pii: a01576  doi: 10.1101/cshperspect.a015768.  [PubMed]
Chaleckis, R., Ebe, M., Pluskal, T., Murakami, I., Kondoh, H., and Yanagida, M. (2014) Unexpected similarities between the Schizosaccharomyces and human blood metabolomes, and novel human metabolites. Mol BioSyst  10(10)  :2538-51  DOI: 10.1039/C4MB00346B  [Mol BioSyst] [PubMed]
Pluskal, T., Ueno, M. and Yanagida, M. (2014) Genetic and Metabolomic Dissection of the Ergothioneine and Selenoneine Biosynthetic Pathway in the Fission Yeast, S. pombe, and Construction of an Overproduction System. PLOS ONE  9(5)  :e97774   doi: 10.1371/journal.pone.0097774  [PlosOne] [PubMed]
Saitoh, S. and Yanagida, M. (2014) Does a shift to limited glucose activate checkpoint control in fission yeast? FEBS Letters.  588(15)  :2373-2378  doi:10.1016/j.febslet.2014.04.047   [FEBS Letters] [PubMed]
Hayashi, T., Ebe, M., Nagao, K., Kokubu, A., Sajiki, K. and Yanagida, M. (2014) Schizosaccharomyces pombe centromere protein Mis19 links Mis16 and Mis18 to recruit CENP-A through interacting with NMD factors and the SWI/SNF complex. Genes to Cells  19(7)  :541-54  doi: 10.1111/gtc.12152  [Genes to Cells] [PubMed]


Sajiki K, Pluskal T, Shimanuki M and Yanagida M (2013) Metabolomic Analysis of Fission Yeast at the Onset of Nitrogen Starvation Metabolites  3(4)  1118-1129  doi:10.3390/metabo3041118  [Metabolites]
Shimanuki M, Uehara L, Pluskal T, Yoshida T, Kokubu A, Kawasaki Y, Yanagida M, (2013) Klf1, a C2H2 Zinc Finger-Transcription Factor, Is Required for Cell Wall Maintenance during Long-Term Quiescence in Differentiated G0 Phase. PlosOne  8(10)  : e78545.   doi:10.1371/journal.pone.0078545  [PlosOne] [PubMed]
Chaleckis R, Pluskal T, Hayashi T, Kondoh H, Yanagida M. (2013) Metabolomic analysis of human blood, plasma and red blood cells in comparison with eukaryotic microbe. Rinsho Ketsueki  2013 Oct;54(10)  :1603-14.  [PubMed]
Earnshaw WC, Allshire RC, Black BE, Bloom K, Brinkley BR, Brown W, Cheeseman IM, Choo KH, Copenhaver GP, Deluca JG, Desai A, Diekmann S, Erhardt S, Fitzgerald-Hayes M, Foltz D, Fukagawa T, Gassmann R, Gerlich DW, Glover DM, Gorbsky GJ, Harrison SC, Heun P, Hirota T, Jansen LE, Karpen G, Kops GJ, Lampson MA, Lens SM, Losada A, Luger K, Maiato H, Maddox PS, Margolis RL, Masumoto H, McAinsh AD, Mellone BG, Meraldi P, Musacchio A, Oegema K, O'Neill RJ, Salmon ED, Scott KC, Straight AF, Stukenberg PT, Sullivan BA, Sullivan KF, Sunkel CE, Swedlow JR, Walczak CE, Warburton PE, Westermann S, Willard HF, Wordeman L, Yanagida M, Yen TJ, Yoda K, Cleveland DW. (2013) Esperanto for histones: CENP-A, not CenH3, is the centromeric histone H3 variant. Chromosome Res.  2013 Apr;21(2)  :101-6.   doi: 10.1007/s10577-013-9347-y.  [Springer] [PubMed]
Tay Z, Eng RJ, Sajiki K, Lim KK, Tang MY, Yanagida M, Chen ES (2013) Cellular Robustness Conferred by Genetic Crosstalk Underlies Resistance against Chemotherapeutic Drug Doxorubicin in Fission Yeast. PLoS ONE  8(1)  :e55041.   doi:10.1371/journal.pone.0055041  [PlosOne] [PubMed]


T. Nakamura, T. Pluskal, Y. Nakaseko and M. Yanagida (2012) Impaired CoA synthesis in fission yeast causes defective mitosis, quiescence-exit failure, histone hypo-acetylation and fragile DNA. Open Biology  2(9)  120117  doi:10.1098/rsob.120117  [RSP] [PubMed]
T. Pluskal, T. Uehara and M. Yanagida., (2012) Highly accurate chemical formula prediction tool utilizing high-resolution mass spectra, MS/MS fragmentation, heuristic rules, and isotope pattern matching. Analytical Chemistry  84(10)  4396-403  doi: 10.1021/ac3000418  [ACS publications] [PubMed]


Akai, Y., Kurokawa, Y., Nakazawa, N., Tonami-Murakami, Y., Suzuki, Y., Yoshimura, S. H., Iwasaki, H., Shiroiwa, Y., Nakamura, T., Shibata, E. and Yanagida, M. (2011) Opposing role of condensin hinge against replication protein A in mitosis and interphase through promoting DNA annealing. Open Biology  1(4)  110023--110023  doi: 10.1098/rsob.110023  [EXiS Open Choice]
Yanagida, M., Ikai, N., Shimanuki, M. and Sajiki, K., (2011) Nutrient limitations alter cell division control and chromosome segregation through growth-related kinases and phosphatases. Philos Trans R Soc Lond B Biol Sci  366(1584)  3508--3520  doi: 10.1098/rstb.2011.0124  [PubMed]
[EXiS Open Choice]
Ikai, N., Nakazawa, N., Hayashi, T. and Yanagida, M., (2011) The reverse, but coordinated, roles of Tor2 (TORC1) and Tor1 (TORC2) kinases for growth, cell cycle and separase-mediated mitosis in Schizosaccharomyces pombe Open Biology  1(3)  110007--110007  doi: 10.1098/rsob.110007  [EXiS Open Choice]
K. Takeda, Tonthat, N. K., Glover, T., Xu, W., Koonin, E. V., Yanagida, M. and Schumacher, M. A., (2011) Implications for proteasome nuclear localization revealed by the structure of the nuclear proteasome tether protein Cut8. Proc Natl Acad Sci U S A  108(41)  16950--16955  doi: 10.1073/pnas.1103617108  [PubMed]
M. Shimura, Y. Toyoda, K. Iijima, M. Kinomoto, K. Tokunaga, K. Yoda, M. Yanagida, T. Sata and Y. Ishizaka (2011) Epigenetic displacement of HP1 from heterochromatin by HIV-1 Vpr causes premature sister chromatid separation. J Cell Biol      doi: 10.1083/jcb.201010118  [PubMed]
K. Takeda, A. Mori and M. Yanagida., (2011) Identification of Genes Affecting the Toxicity of Anti-Cancer Drug Bortezomib by Genome-Wide Screening in S. pombe PLoS One  6(7)  e22021  doi:10.1371/journal.pone.0022021  [PubMed]
N. Nakazawa, R. Mehrotra, M. Ebe and M. Yanagida., (2011) Condensin phosphorylated by the Aurora-B-like kinase Ark1 is continuously required until telophase in a mode distinct from Top2. J Cell Sci  124  1795--1807  [PubMed]
Y. Shiroiwa , T. Hayashi , Y. Fujita , A. Villar-Briones , N. Ikai , K. Takeda , M. Ebe and M. Yanagida., (2011) Mis17 Is a Regulatory Module of the Mis6-Mal2-Sim4 Centromere Complex That Is Required for the Recruitment of CenH3/CENP-A in Fission Yeast. PLoS One  6  e17761  [PubMed]
Kiyomitsu, T. , Murakami, H. and Yanagida, M., (2011) Protein interaction domain mapping of human kinetochore protein Blinkin reveals a consensus motif for binding of spindle assembly checkpoint proteins Bub1 and BubR1. Molecular and Cellular Biology  5  998-1011  doi: 10.1128/​MCB.00815-10  [PubMed]
Takahashi, Katsunori , Imano, Ryota , Kibe, Tatsuya , Seimiya, Hiroyuki , Muramatsu, Yukiko , Kawabata, Naoki , Tanaka, Genki , Matsumoto, Yoshitake , Hiromoto, Taisuke , Koizumi, Yuka , Nakazawa, Norihiko , Yanagida, Mitsuhiro , Yukawa, Masashi , Tsuchiya, Eiko and Ueno, Masaru, (2011) Fission yeast Pot1 and RecQ helicase are required for efficient chromosome segregation. Molecular and cellular biology  (31)3  495-506  doi: 10.1128/MCB.00613-10  [PubMed]
[EXiS Open Choice]
T. Pluskal , T. Hayashi , S. Saitoh , A. Fujisawa and M. Yanagida., (2011) Specific biomarkers for stochastic division patterns and starvation-induced quiescence under limited glucose levels in fission yeast. FEBS J  278  1299--1315  [PubMed]


K. Takeda , T. Yoshida , S. Kikuchi , K. Nagao , A. Kokubu , T. Pluskal , A. Villar-Briones , T. Nakamura and M. Yanagida., (2010) Synergistic roles of the proteasome and autophagy for mitochondrial maintenance and chronological lifespan in fission yeast. Proc Natl Acad Sci U S A  107  3540--3545  [PubMed]
M. Yanagida., (2010) Mostly DNA, a bit of glucose, and the next 50 years. Mol Biol Cell  21  3826  [PubMed]
T. Pluskal , S. Castillo , A. Villar-Briones and M. Oresic., (2010) MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data. BMC Bioinformatics  11  395  [PubMed]
K. Takeda and M. Yanagida., (2010) In quiescence of fission yeast, autophagy and the proteasome collaborate for mitochondrial maintenance and longevity. Autophagy  6    [PubMed]
Kiyomitsu T, Iwasaki O, Obuse C, Yanagida M., (2010) Inner centromere formation requires hMis14, a trident kinetochore protein that specifically recruits HP1 to human chromosomes. J Cell Biol.  188   791-807  doi:10.1083/jcb.200908096  [PubMed]
T. Pluskal , T. Nakamura , A. Villar-Briones and M. Yanagida., (2010) Metabolic profiling of the fission yeast S. pombe: quantification of compounds under different temperatures and genetic perturbation. Mol Biosyst  6  182--198  [PubMed]


M. Yanagida., (2009) Cellular quiescence: are controlling genes conserved? Trends Cell Biol  19  705--715  [PubMed]
M. Yanagida., (2009) Clearing the way for mitosis: is cohesin a target? Nat Rev Mol Cell Biol  10  489--496  [PubMed]
Hanyu, Y. , Imai, K. K. , Kawasaki, Y. , Nakamura, T. , Nakaseko, Y. , Nagao, K. , Kokubu, A. , Ebe, M. , Fujisawa, A. , Hayashi, T. , Obuse, C. and Yanagida, M. (2009) Schizosaccharomyces pombe cell division cycle under limited glucose requires Ssp1 kinase, the putative CaMKK, and Sds23, a PP2A-related phosphatase inhibitor. Genes Cells  14  539--554  [PubMed]
K. Sajiki , M. Hatanaka , T. Nakamura , K. Takeda , M. Shimanuki , T. Yoshida , Y. Hanyu , T. Hayashi , Y. Nakaseko and M. Yanagida., (2009) Genetic control of cellular quiescence in S. pombe. J Cell Sci  122  1418--1429  [PubMed]


N. Nakazawa , T. Nakamura , A. Kokubu , M. Ebe , K. Nagao and M. Yanagida., (2008) Dissection of the essential steps for condensin accumulation at kinetochores and rDNAs during fission yeast mitosis. J Cell Biol  180  1115--1131  [PubMed]
Y. Adachi , A. Kokubu , M. Ebe , K. Nagao and M. Yanagida., (2008) Cut1/separase-dependent roles of multiple phosphorylation of fission yeast cohesion subunit Rad21 in post-replicative damage repair and mitosis. Cell Cycle  7  765--776  [PubMed]


T. Hayashi , M. Hatanaka , K. Nagao , Y. Nakaseko , J. Kanoh , A. Kokubu , M. Ebe and M. Yanagida., (2007) Rapamycin sensitivity of the Schizosaccharomyces pombe tor2 mutant and organization of two highly phosphorylated TOR complexes by specific and common subunits. Genes Cells  12  1357--1370  [PubMed]
M. Shimanuki , S. Y. Chung , Y. Chikashige , Y. Kawasaki , L. Uehara , C. Tsutsumi , M. Hatanaka , Y. Hiraoka , K. Nagao and M. Yanagida., (2007) Two-step, extensive alterations in the transcriptome from G0 arrest to cell division in Schizosaccharomyces pombe. Genes Cells  12  677--692  [PubMed]


K. Takeda and M. Yanagida. (2006) [How does fission yeast cut8 regulate the nuclear localization of proteasome?]. Tanpakushitsu Kakusan Koso  51  1241--1244  [PubMed]
S. Mochida and M. Yanagida., (2006) Distinct modes of DNA damage response in S. pombe G0 and vegetative cells. Genes Cells  11  13--27  [PubMed]
K. Nagao and M. Yanagida., (2006) Securin can have a separase cleavage site by substitution mutations in the domain required for stabilization and inhibition of separase. Genes Cells  11  247--260  [PubMed]


K. Takeda and M. Yanagida., (2005) Regulation of nuclear proteasome by Rhp6/Ubc2 through ubiquitination and destruction of the sensor and anchor Cut8. Cell  122  393--405  [PubMed]


K. Nagao , Y. Adachi and M. Yanagida., (2004) Separase-mediated cleavage of cohesin at interphase is required for DNA repair. Nature  430  1044--1048  [PubMed]

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  Publication List, Yanagida Lab in Graduate School of Biostudies, Kyoto University from 1980 to 2011 March.